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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2592352 chr2:61665336 C/T C2orf74 chr2:61372203-61391964:+ 0.59 5.63 7.36E-7 Box Plot
ACC rs2592493 chr2:61382337 C/A C2orf74 chr2:61372203-61391964:+ 0.64 6.2 9.41E-8 Box Plot
ACC rs2592494 chr2:61381528 T/C C2orf74 chr2:61372203-61391964:+ 0.65 6.23 8.33E-8 Box Plot
ACC rs2592496 chr2:61375063 T/C C2orf74 chr2:61372203-61391964:+ 0.6 6.32 6.01E-8 Box Plot
ACC rs2593625 chr2:61668769 C/T C2orf74 chr2:61372203-61391964:+ 0.59 5.64 7.01E-7 Box Plot
ACC rs2593626 chr2:61665184 C/A C2orf74 chr2:61372203-61391964:+ 0.59 5.63 7.36E-7 Box Plot
ACC rs2600672 chr2:61536740 A/G C2orf74 chr2:61372203-61391964:+ 0.54 5.22 3.13E-6 Box Plot
ACC rs2608828 chr4:39453730 C/G RPL9 chr4:39455744-39460568:- 1.03 12.48 2.87E-17 Box Plot
ACC rs2608829 chr4:39453898 C/T RPL9 chr4:39455744-39460568:- 0.71 5.42 1.55E-6 Box Plot
ACC rs2617434 chr5:96271638 A/G ERAP2 chr5:96211643-96255420:+ 0.82 8.24 5.3E-11 Box Plot
ACC rs2617435 chr5:96273034 T/C ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs2617439 chr5:96275154 G/A ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot
ACC rs2617447 chr5:96267655 A/G ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs2621978 chr2:132204319 A/G LOC150776 chr2:132250386-132279149:+ 0.5 6.25 7.62E-8 Box Plot
ACC rs2632260 chr2:99771590 G/T TSGA10 chr2:99613724-99771427:- 0.56 5.5 1.15E-6 Box Plot